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Image Search Results
Journal: Oncotarget
Article Title: High Myc expression and transcription activity underlies intra-tumoral heterogeneity in triple-negative breast cancer
doi: 10.18632/oncotarget.15891
Figure Lengend Snippet: ( A ) The impact of Myc siRNA knockdown on the SRR2 reporter activity was measured by luciferase activity in RU and RR cells derived from MDA-MB-231 and SUM-149 cells. The western blots below showed the Myc knockdown efficiency. ( B ) RU cells derived from both TNBC cell lines were transiently transfected with pcDNA3.3-Myc. pcDNA empty vector (EV) was included as a negative control. The impact of enforced transient transfection of MYC on the SRR2 reporter activity was measured by luciferase activity. The western blots below showed the MYC transfection efficiency. β-actin protein expression was used as a loading control of the experiment. ( C ) RU cells derived from both TNBC cell lines were stably transfected with MYC and EV (negative control). The SRR2 probe pull-down assay was performed to assess the Myc and SRR2 binding in RU- MYC and RU-EV cells. The western blots in the right panel showed the input of the pull-down assay. HDAC-1 was used as a loading control of the experiment. ( D ) ChIP-qPCR was performed in RU- MYC and RU-EV cells derived from MDA-MB-231 cells to determine the Myc binding to SRR2 DNA sequence. RR-EV cells were included as a control of the experiment. ( E ) The impact of Myc siRNA knockdown on the Myc binding to SRR2 DNA sequence was performed using ChIP-qPCR in RR cells derived from MDA-MB-231 cells. RU cells transfected with scrambled siRNA were included as a control of the experiment. ( F ) The relative mRNA level of CCND1 was measured by qRT-PCR after Myc knockdown in RU and RR cells derived from MDA-MB-231 cells. The mRNA expression level was normalized with GAPDH. ( G ) The relative mRNA level of Myc transcript targets, CCND1 and TERT was measured by qRT-PCR in RU- MYC and RU-EV cells derived from MDA-MB-231 cells. The mRNA expression levels were normalized with GAPDH.
Article Snippet: The set of JASPAR vertebrate core set of transcription factors (Downloaded April 17, 2013) was applied to the reporter sequence on both strands with a p-value < 0.001. pcDNA3.3-Myc plasmid was a gift from Derrick Rossi (Addgene plasmid #26818) and
Techniques: Knockdown, Activity Assay, Luciferase, Derivative Assay, Western Blot, Transfection, Plasmid Preparation, Negative Control, Expressing, Control, Stable Transfection, Pull Down Assay, Binding Assay, ChIP-qPCR, Sequencing, Quantitative RT-PCR